PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436317.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 262aa    MW: 29305.8 Da    PI: 10.4325
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85.1e-084696146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++W +eE+e l+ +++++G+g Wk+  r  +       R+  ++k++w++
   XP_026436317.1 46 KQKWAAEEEEALIAGINKHGTGKWKKRRRDPQfshvlAVRSNIDLKDKWRN 96
                     79***********************94444448888866888888888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLSISHPSLK STSIILFLLV MILVYASPPP PPPGPPPPNL QMGALKQKWA AEEEEALIAG  60
INKHGTGKWK KRRRDPQFSH VLAVRSNIDL KDKWRNMSVS ATGEGSRPRD GKAAVIKPKV  120
PKTLSVFQYP PSSSQATEDA NDKVLDPTKN TPDRKQPPPR YNAMILETVS NITDPNGADI  180
GSINDFVEQR HEVPSNFRRL LSSNLRRLVA QEKLEKVQLL SHETKVQTYY KIKKDETFGT  240
KAQTPKPSQV CWLHIVNGLK HC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.11e-35MYB_related family protein