PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436509.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 155aa MW: 17842.4 Da PI: 10.935

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWTteEde+l ++++ G g+W++ ++ g+ R++k+c++rw++yl XP_026436509.1 14 RGRWTTEEDERLMKYIQHNGEGSWRSLPKNAGLLRCGKSCRLRWLNYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	53.5	5.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+ l++++++ lG++ W++Ia +++ gRt++++k++w+++l XP_026436509.1 67 RGNISADEENLIIKLHNTLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MGRAPCCEKV GLKRGRWTTE EDERLMKYIQ HNGEGSWRSL PKNAGLLRCG KSCRLRWLNY 60 LRKDLKRGNI SADEENLIIK LHNTLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRRIESFI 120 RRPSSSNSQS LPIIMDIAKL NGEQKQKGGR TSRAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-77	MYB family protein