PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436640.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 473aa    MW: 54041.4 Da    PI: 6.6387
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like54.13.5e-17212277155
         G2-like   1 kprlrWtpeLHerFveaveqLGGse...........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r++Wt eL ++F  ++e+LG +            +A+Pk+il+lm+v+gL +ehv+SHLQkYR 
  XP_026436640.1 212 KTRIVWTDELNRKFDAVIEKLGIEStiltlylsyfcNAVPKKILQLMNVPGLKREHVASHLQKYRQ 277
                     68*******************6443444444555557****************************6 PP
2Myb_DNA-binding249.4e-08216276348
                      SS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..............tWktIartmg.kgRtlkqcksrwqkyl 48 
                       WT e+  ++  ++++lG +               +k+I + m+  g+ ++++ s++qky+
   XP_026436640.1 216 VWTDELNRKFDAVIEKLGIEstiltlylsyfcnaVPKKILQLMNvPGLKREHVASHLQKYR 276
                      6***********************************************************7 PP
3Response_reg56.61.5e-19381471107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEES..SHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaead..dgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                     vl+ dD+p +++ ++++l++  y +v++ +  ++e +l +l++ +  +D++l  + m +mdGlellk++ +e + + +++++++++++ ++++l 
  XP_026436640.1  38 VLVTDDDPEFLQHIEKLLKELLY-QVTTYSklQAENVLSTLQAARnkFDIVLSSVHMANMDGLELLKHMLAEMDIPVVMMMSSEDDNNIVIKCLT 131
                     8999*******************.66554411577788888777788**********************76663445555668889********* PP

                     TTESEEEESS--HHHH CS
    Response_reg  92 aGakdflsKpfdpeel 107
                      Ga d+l Kp++++++
  XP_026436640.1 132 EGACDCLIKPIERKDI 147
                     ***********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    
MSRGLEESSQ ETQQHEVVKK ENPTNEGLPE KFPEGVRVLV TDDDPEFLQH IEKLLKELLY  60
QVTTYSKLQA ENVLSTLQAA RNKFDIVLSS VHMANMDGLE LLKHMLAEMD IPVVMMMSSE  120
DDNNIVIKCL TEGACDCLIK PIERKDIELI FKHVIIRKMR VEHSCECECH HKSPETSDFG  180
VALGNSKSLR KRKNGEAIDK DVDTSGMSMA KKTRIVWTDE LNRKFDAVIE KLGIESTILT  240
LYLSYFCNAV PKKILQLMNV PGLKREHVAS HLQKYRQSYR KSQGYPACNL NTPMNQPESH  300
LAPLLHGGIQ YSNKFQNHGM QDGQLGRPTR TIDPSLLSNG RFGPDYSEFV TKAGYIPHQS  360
QMRDHYMNNL PGLMEQQLFL NGQDYNAIET FNRRNQPYSG GDLKTNYMTA EFLPSYHSID  420
STLNLPNFPT NNMIHHEQSF QGSIDENCMK WRQQPPYAGS DLDTRTVYTP LQH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187193KSLRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-57ARR-B family protein