PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436661.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 417aa MW: 47244.4 Da PI: 6.3992

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_026436661.1 13 RGLWSPEEDEKLIRCIATHGHGCWSSVPKLAGLERCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	50.9	3.6e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_026436661.1 66 RGSFSAQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MGHHCCSKQK VKRGLWSPEE DEKLIRCIAT HGHGCWSSVP KLAGLERCGK SCRLRWINYL 60 RPDLKRGSFS AQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLVAQGI 120 DPKTHNLSSS STSGSSSSYN NACNNINNHH IYSQQPTSSI YHSHQYHHQL NSPQKIMVMV 180 RDYPSMDMMK NTQEIPATFN VTSASPVQQP RPYRPLYDLV SIPSTNLNYC QNNNNLTNSN 240 INYLSVNGST NLESCVSLVD TGNISHKPIS YSSLVHPSSD TGFEQFSSLE EHCMWASGGK 300 GESFEEAAVA LQPTQQLPDC EERYKQNYQK QRQEQENVNV FTLEENPFEF DESDEVTVKD 360 ISAGDTDKRD QINSLSSLSN TNFSNFDFEF IDSTIMSCGI YSNMSSSIDD QLITWDC

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MGHHCCSKQK VKRGLWSPEE DEKLIRCIAT HGHGCWSSVP KLAGLERCGK SCRLRWINYL  60
RPDLKRGSFS AQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLVAQGI  120
DPKTHNLSSS STSGSSSSYN NACNNINNHH IYSQQPTSSI YHSHQYHHQL NSPQKIMVMV  180
RDYPSMDMMK NTQEIPATFN VTSASPVQQP RPYRPLYDLV SIPSTNLNYC QNNNNLTNSN  240
INYLSVNGST NLESCVSLVD TGNISHKPIS YSSLVHPSSD TGFEQFSSLE EHCMWASGGK  300
GESFEEAAVA LQPTQQLPDC EERYKQNYQK QRQEQENVNV FTLEENPFEF DESDEVTVKD  360
ISAGDTDKRD QINSLSSLSN TNFSNFDFEF IDSTIMSCGI YSNMSSSIDD QLITWDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	1e-78	MYB family protein