PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436684.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 251aa    MW: 29234.9 Da    PI: 10.6656
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.42.6e-1315119198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.....-EEEEEE...EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.....rsWevkliy.rkksgr.....yvltkGWkeFvkangLkegDfvvFkl 84 
                     ffkvl+++d  k  rl++p+ f+++ +gk +++  l++ + s+     + W++k+     +sg+      v++ GW eFv+ + L+ +Df+vF++
  XP_026436684.1  15 FFKVLIKEDFRK--RLRVPRAFMKHLNGKLPKTCILRISSISSssssyNGWTIKMEKiASGSGAnylhdLVFSCGWPEFVNHHFLEWKDFLVFTY 107
                     899997777665..59*******666555444445666665556789999*****665333333455558899********************** PP

                     -SSSEE..EEEEE- CS
              B3  85 dgrsefelvvkvfr 98 
                     +g+sef  +v ++ 
  XP_026436684.1 108 KGKSEF--NVDIYG 119
                     *99999..777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MKRNLESKTM KRPSFFKVLI KEDFRKRLRV PRAFMKHLNG KLPKTCILRI SSISSSSSSY  60
NGWTIKMEKI ASGSGANYLH DLVFSCGWPE FVNHHFLEWK DFLVFTYKGK SEFNVDIYGR  120
NGCLKELHLE NKGTKALHGH NGYWAHDGQR KAIKPWGMTQ RNKVGGESTE HSFPVIWRQP  180
EKMRIPRVWV EKIEGLQNKK CIVLKDPKGR LWRLSMQPQK DGCIDIRKGW ADFSIGNRLT  240
EGTQIWRNEG V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.19e-13B3 family protein