PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436776.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 385aa MW: 42965.7 Da PI: 4.4915

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.7	6.5e-37	107	206	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 klfqrlw+++Dei lLqG++df++++g+ s+++++ fy+ +k++++++++ksqlveK+rrLKkK+++ v++++sgk+++f+++hdq +fe+s XP_026436776.1 107 KLFQRLWTDKDEIGLLQGFLDFNTQRGTlnsSYHHETGPFYDHIKNRLNLDFNKSQLVEKLRRLKKKYRNVVARVNSGKDFNFKTPHDQTTFEIS 201 579***********************98566669******************************************************* PP DUF573 93 kkiWg 97 +kiW XP_026436776.1 202 RKIWS 206 **6 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSSIKEEDLI IKDEEQQRQP EEQEPEQIGE DGDDEDEEPE EDGESEDLTI SNLEATIATP 60 IASAPPLNGT SYQTPPPPQP QQTPITAAMG TGAKSIISTS SGDESRKLFQ RLWTDKDEIG 120 LLQGFLDFNT QRGTLNSSYH HETGPFYDHI KNRLNLDFNK SQLVEKLRRL KKKYRNVVAR 180 VNSGKDFNFK TPHDQTTFEI SRKIWSGSHN CSNIVDDTLV IMEDDNNNSN NINNESTGNE 240 EIKPNVCVNG NDEKVPRGVM GGVSSTLLRK RGVKRPAEEE LMKTCGNKDM ESNSVSNVIE 300 ETVKSCLTPL FKELINCVMN GQSNAGFLGF NGMGLNPLGA AGKDEVIDEK WRKQQILELE 360 VYSKRVELVQ EQIKSALEDL KSTGT

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSSIKEEDLI IKDEEQQRQP EEQEPEQIGE DGDDEDEEPE EDGESEDLTI SNLEATIATP  60
IASAPPLNGT SYQTPPPPQP QQTPITAAMG TGAKSIISTS SGDESRKLFQ RLWTDKDEIG  120
LLQGFLDFNT QRGTLNSSYH HETGPFYDHI KNRLNLDFNK SQLVEKLRRL KKKYRNVVAR  180
VNSGKDFNFK TPHDQTTFEI SRKIWSGSHN CSNIVDDTLV IMEDDNNNSN NINNESTGNE  240
EIKPNVCVNG NDEKVPRGVM GGVSSTLLRK RGVKRPAEEE LMKTCGNKDM ESNSVSNVIE  300
ETVKSCLTPL FKELINCVMN GQSNAGFLGF NGMGLNPLGA AGKDEVIDEK WRKQQILELE  360
VYSKRVELVQ EQIKSALEDL KSTGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-63	GeBP family protein