PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026437312.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 192aa    MW: 21833 Da    PI: 9.0829
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026437312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY188.33.8e-58101634170
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                      +  eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+    q l+ ++         ++ +++++ + ++   ++++++  +v +
  XP_026437312.1  10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQDL--------QTPNNGDHFQRIDLPSSSKHNQDIQVMQ 96 
                     5789********************************************99999998884........4556677777777766666665554444 PP

           YABBY  99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                      +    +  ++ +   v++PPek+ rvPsayn+fikeeiqrika+nPdi hr  fs+aaknWahfP++h+gl
  XP_026437312.1  97 VT----TAAKTEK-RIVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKVFSTAAKNWAHFPHAHYGL 163
                     22....2222222.3579****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL  60
QSLSLQDLQT PNNGDHFQRI DLPSSSKHNQ DIQVMQVTTA AKTEKRIVNQ PPEKKHRVPS  120
AYNQFIKEEI QRIKANNPDI NHRKVFSTAA KNWAHFPHAH YGLKLETKNN QAKLREEGSD  180
LLMKRARLPN EW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.17e-76YABBY family protein