PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437313.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 183aa MW: 20821.9 Da PI: 9.3496

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	75.4	1.8e-23	10	84	4	78
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee.lleelkve 78 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ l++ ++ ++++ + XP_026437313.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQD-LQRIDLPSsSKHNQDIQ 84 5789********************************************9999998887.55554444122222222 PP
2	YABBY	112	1e-34	79	154	97	170
YABBY 97 sseklsenedeevprvpp..virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ ++ + ++++ + v++PPek+ rvPsayn+fikeeiqrika+nPdi hr fs+aaknWahfP++h+gl XP_026437313.1 79 HNQDIQVMQVTTAAKTEKriVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKVFSTAAKNWAHFPHAHYGL 154 333333333333333333339*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQR IDLPSSSKHN QDIQVMQVTT AAKTEKRIVN QPPEKKHRVP SAYNQFIKEE 120 IQRIKANNPD INHRKVFSTA AKNWAHFPHA HYGLKLETKN NQAKLREEGS DLLMKRARLP 180 NEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-75	YABBY family protein