PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437324.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 952aa MW: 107320 Da PI: 6.7218

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	6	69	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++l+ +d++ W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ +l+++++r+ XP_026437324.1 6 QELVARDLHDVAWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDEKSQLLLGIRRA 69 48999*********************************************..45677789999997 PP
2	Auxin_resp	123.8	1.2e-40	94	176	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFvv+++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+ S+Wr+L+ XP_026437324.1 94 AAHAAASNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKSSQWRNLQ 176 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MQPPAQELVA RDLHDVAWTF RHIYRGQPKR HLLTTGWSVF VSTKRLFAGD SVLFIRDEKS 60 QLLLGIRRAN RQQPALSSSV ISSDSMHIGI LAAAAHAAAS NSPFTIFYNP RASPSEFVVP 120 LAKYNKAMYT QVSLGMRFRM MFETEESGVR RYMGTITGIS DLDPVRWKSS QWRNLQVGWD 180 ESAAGERPSR VSIWDIEPVA TPFYICPPPF FRPKFSNHPD HESDVENAFK SAMPWLGDDL 240 GGIKDPQNPM FPGLSLVQWM SMQQQNPQLS ASQFPSMISS SLHNNNLTTD DPSKILNFQS 300 HVSGGPSVHY NLPKTDQQTE LLQQSSLLWA QQQQQRHQQL QNLGINAQQQ QQLHPQQQQL 360 LQQQQKQLQQ QQQQQQQQHQ QQQQQQQHQQ QQQHHQQQQQ QQQQQSQIQQ KQLQQQQQLQ 420 NEHHQQQLLR SASISSGLST PTQIIDQNLQ KPLNYSQLQQ QLPTSNPQSQ QNFHNVNQNP 480 LLLPSLPQDV QFQRQLEQQQ SLLQRQQQHN AHLQPLPMSQ HELQLQLLQK LQQQQQFLSQ 540 VSPRVQPQVS QQQQIHQQSQ QLQQQLPSQQ PQLGSVANFS QPLQNQQQHF PTNHLLGQQK 600 PTAQIRAHSG LTDGDAPSCS TSPSTNNCQV SGSSFLNRSH PGSGTLLEDM VAQPANSSVQ 660 ELQSKSDVRI KHELPSMKEP EHLGYRGATT DPVEASSTAT SYCLDGGSLP TNFSMPNYCL 720 DGDVQVDTPN NLLFGVNIDG LTPEALISRR FGSGKDLHNL ISSYGGTTQR DIETEISTAA 780 ISSQSFGVTD MSFKPVCSGD GPVNDNGVLN RGLWANQTPQ QRMRTFTKVQ KRGSVGRSID 840 ITRYKEYEEL RYDLARMFGI EGQLEESQRS EWKLVYVDHE NDILLVGDDP WEEFVSCVQS 900 IKILSSAEVQ QLSLDGDLGS VPAPTQTCSG SGSGNAWKGQ YDEHSAAASF ER

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MQPPAQELVA RDLHDVAWTF RHIYRGQPKR HLLTTGWSVF VSTKRLFAGD SVLFIRDEKS  60
QLLLGIRRAN RQQPALSSSV ISSDSMHIGI LAAAAHAAAS NSPFTIFYNP RASPSEFVVP  120
LAKYNKAMYT QVSLGMRFRM MFETEESGVR RYMGTITGIS DLDPVRWKSS QWRNLQVGWD  180
ESAAGERPSR VSIWDIEPVA TPFYICPPPF FRPKFSNHPD HESDVENAFK SAMPWLGDDL  240
GGIKDPQNPM FPGLSLVQWM SMQQQNPQLS ASQFPSMISS SLHNNNLTTD DPSKILNFQS  300
HVSGGPSVHY NLPKTDQQTE LLQQSSLLWA QQQQQRHQQL QNLGINAQQQ QQLHPQQQQL  360
LQQQQKQLQQ QQQQQQQQHQ QQQQQQQHQQ QQQHHQQQQQ QQQQQSQIQQ KQLQQQQQLQ  420
NEHHQQQLLR SASISSGLST PTQIIDQNLQ KPLNYSQLQQ QLPTSNPQSQ QNFHNVNQNP  480
LLLPSLPQDV QFQRQLEQQQ SLLQRQQQHN AHLQPLPMSQ HELQLQLLQK LQQQQQFLSQ  540
VSPRVQPQVS QQQQIHQQSQ QLQQQLPSQQ PQLGSVANFS QPLQNQQQHF PTNHLLGQQK  600
PTAQIRAHSG LTDGDAPSCS TSPSTNNCQV SGSSFLNRSH PGSGTLLEDM VAQPANSSVQ  660
ELQSKSDVRI KHELPSMKEP EHLGYRGATT DPVEASSTAT SYCLDGGSLP TNFSMPNYCL  720
DGDVQVDTPN NLLFGVNIDG LTPEALISRR FGSGKDLHNL ISSYGGTTQR DIETEISTAA  780
ISSQSFGVTD MSFKPVCSGD GPVNDNGVLN RGLWANQTPQ QRMRTFTKVQ KRGSVGRSID  840
ITRYKEYEEL RYDLARMFGI EGQLEESQRS EWKLVYVDHE NDILLVGDDP WEEFVSCVQS  900
IKILSSAEVQ QLSLDGDLGS VPAPTQTCSG SGSGNAWKGQ YDEHSAAASF ER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-156	ARF family protein