PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437414.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 340aa MW: 38698.2 Da PI: 9.8321

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	93.8	1.2e-29	75	161	1	84
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kv tpsdv++++rlv+pk +ae++ ++++e+s l++ed++g+ W++++ y+++s++yv+tkGW++Fvk+++L++gD+v F + XP_026437414.1 75 FDKVVTPSDVGRLNRLVIPKYHAEKYfpsKSNNEKSLLLSFEDRNGKPWRFRYAYWNSSQSYVMTKGWSKFVKEKRLDAGDTVYFGR 161 89*************************8888999***********************************************84 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MAHDNSSTCI RQNFTSSTFS PSSSRHKDVV RVHYHEALQQ QRNHKLLSNS SVSGISKSCA 60 VEGADHEHIQ KQYMFDKVVT PSDVGRLNRL VIPKYHAEKY FPSKSNNEKS LLLSFEDRNG 120 KPWRFRYAYW NSSQSYVMTK GWSKFVKEKR LDAGDTVYFG RGAAESYKDR YYIDWKHKPY 180 SPGDLSLYYH HLTNPLSNFS RMQTSGVSSP TRDHLQLNYD RKQHHSYQQQ LQKRLLPSTS 240 IASYGNCSNI VLSNNPAGSG PVTYVGSTSS SPTVHDCQAH EHQYQKSGTA RLMQQNYPGG 300 HKQSHMEMIL NSVPVVHGKA ATKRVRLFGV NLECLVSEDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01030.1	5e-49	B3 family protein