PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437476.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 370aa MW: 42017.9 Da PI: 7.3552

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++kq+G+g+W++++ + g+ R+ k+c++rw +yl XP_026437476.1 14 KGPWTPEEDLILTSYIKQHGSGNWRSVPTYTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	45.4	1.9e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++ + lG++ W++Ia++++ Rt++++k++w+++l XP_026437476.1 67 RGKFTEAEEKMIISLQSVLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRPPCCDIV GIKKGPWTPE EDLILTSYIK QHGSGNWRSV PTYTGLLRCS KSCRLRWTNY 60 LRPEIKRGKF TEAEEKMIIS LQSVLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLDMFH 120 SVRHRPHHLG SSSSLDSSTS FQFFKREHHH LIHKSSSLNK FISTITSNST STPSSTTYAF 180 STGNVSRLLK DWMKTSPDEL NRNTTLKLKT TQTREKVLPD GIDNSNNNSG NNNLDDGKIL 240 AKKIKIEEIC NGDDDFISKE AADYNFESIL TFENISSCWE QNSSLDSTTV HGSTSATREE 300 CQTTTTTTTT TPINDKVDPI SESGRQGLIE GDQNQPLFCL LEKWLMDHEA TGQVLEEDHR 360 QKSLQYFDQI

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRPPCCDIV GIKKGPWTPE EDLILTSYIK QHGSGNWRSV PTYTGLLRCS KSCRLRWTNY  60
LRPEIKRGKF TEAEEKMIIS LQSVLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLDMFH  120
SVRHRPHHLG SSSSLDSSTS FQFFKREHHH LIHKSSSLNK FISTITSNST STPSSTTYAF  180
STGNVSRLLK DWMKTSPDEL NRNTTLKLKT TQTREKVLPD GIDNSNNNSG NNNLDDGKIL  240
AKKIKIEEIC NGDDDFISKE AADYNFESIL TFENISSCWE QNSSLDSTTV HGSTSATREE  300
CQTTTTTTTT TPINDKVDPI SESGRQGLIE GDQNQPLFCL LEKWLMDHEA TGQVLEEDHR  360
QKSLQYFDQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	1e-71	MYB family protein