PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437598.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 271aa MW: 30948.3 Da PI: 9.9441

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k++G g W+ + + g++R++k+c++rw++yl XP_026437598.1 14 RGAWTATEDKILSDYIKKYGEGGWRNLPTKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	51.8	1.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_026437598.1 67 RGNISSDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999***************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGRSPCCSKE GLNRGAWTAT EDKILSDYIK KYGEGGWRNL PTKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SSDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLAKKIQNHS 120 ASSSTRKSPI KSKEKKKTSV ETRTSKPKIK SSTVVKTKAL RCTKLFFSPT PQTQTVENRD 180 KIRGSTEHYT EMKLETVNGF LGCPLRGKNL LQNYEMENCC FSEFSQLSNL GVDRMEDFSS 240 PSSGDSLFLL DEMLQSWTGN EYCIQEGWLK E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	2e-62	MYB family protein