PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026437630.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-YC

Protein Properties

Length: 256aa MW: 29311.8 Da PI: 5.1443

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026437630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.6	1.2e-55	73	176	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_026437630.1 73 QLQVFWSNQmqdIEHVNDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFL 167 89****988889***************************************************************************** PP NF-YC 93 vdivprdel 101 vdivprd+l XP_026437630.1 168 VDIVPRDDL 176 *****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MDKSGNQVPK QEQERQPTRE DASSPEFEQE TEMEASDSPR PEGPPSFSGP QHQLSYPPQV 60 QHFHQQQQQQ QQQLQVFWSN QMQDIEHVND FKNHTLPLAR IKKIMKADED VRMISAEAPV 120 VFAKACELFI LELTLRSWIH TEENKRRTLQ KNDIAAAITR TDIFDFLVDI VPRDDLKEDA 180 TLGFPRPAEP LPYYFIPRVP QHPSQVGHPV LTYDAGAAHQ PRPPLAAAFM PWAQPPPQQQ 240 QGQQQPPQPQ PQQTDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	152	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	2e-67	NF-YC family protein