PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026438093.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 516aa    MW: 57704 Da    PI: 4.8254
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026438093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS448.35e-1371465151373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+avs++dl +a++l+  l++++s +g+p+qRl ay++e+L arl+++++++yk+l+++e +   s+e l+++++++e++P++kf++
  XP_026438093.1 146 LKEVLISCAKAVSDDDLPRANQLIGDLRNMVSVSGEPIQRLGAYMLEGLVARLSSTGHGIYKSLKCKEPA---SAELLSYMHILYEACPYFKFGY 237
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI eav+ e+ +HiiDf+i qG QW++L+qaLasRp+gpp++RiTg+++++s   +   l+ +g+rL+++A+++++pfef++ +  +  d
  XP_026438093.1 238 MSANGAIAEAVKDENYIHIIDFQIAQGSQWITLMQALASRPGGPPHIRITGIDDSNSAyaRGGGLQIVGQRLSRLADSCKIPFEFHA-APVSGVD 331
                     ******************************************************988899999************************.8889999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+++L+v+pgEa+aVn+ + lh+++desvs+e++rd++++l+kslsPkvv++veqe+++n++ Fl rfle+l+yy+a+f+s++a+l+r+++eri
  XP_026438093.1 332 IEFSSLEVRPGEAIAVNFPYVLHHMPDESVSTENHRDRLIRLIKSLSPKVVTLVEQESNTNTAAFLPRFLETLNYYTAMFESIDATLSRDHKERI 426
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r++vn++acegaer+erhe l+kW++r+++aGF+p+pls+ +++++k+ll  + ++ y++ e++g+l+lgW+dr Lv+ +aW
  XP_026438093.1 427 NVEQHCLARDVVNIIACEGAERVERHEVLGKWKSRFRMAGFTPYPLSSVVNSTIKTLLDSYCEK-YKLYEDDGALYLGWMDRDLVVSCAW 515
                     *************************************************************955.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MRTLDERRFT DESIHEMHYP AQTSSEQYCT LESSSATGGY MVYNTPSTVS FSPNGSPMSQ  60
QESHTYPQEP NHSPYDANGS PLSLSCITDN ENDMWSKLKE LETAMLGPDT DTMDSPDSSF  120
QGGLNLDQSA FDWNQMMEIM NPKRDLKEVL ISCAKAVSDD DLPRANQLIG DLRNMVSVSG  180
EPIQRLGAYM LEGLVARLSS TGHGIYKSLK CKEPASAELL SYMHILYEAC PYFKFGYMSA  240
NGAIAEAVKD ENYIHIIDFQ IAQGSQWITL MQALASRPGG PPHIRITGID DSNSAYARGG  300
GLQIVGQRLS RLADSCKIPF EFHAAPVSGV DIEFSSLEVR PGEAIAVNFP YVLHHMPDES  360
VSTENHRDRL IRLIKSLSPK VVTLVEQESN TNTAAFLPRF LETLNYYTAM FESIDATLSR  420
DHKERINVEQ HCLARDVVNI IACEGAERVE RHEVLGKWKS RFRMAGFTPY PLSSVVNSTI  480
KTLLDSYCEK YKLYEDDGAL YLGWMDRDLV VSCAWI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein