PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026438239.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 202aa    MW: 22465.9 Da    PI: 9.7716
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026438239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.4e-052749123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F ++  L  H++ H
  XP_026438239.1 27 YSCNYCRRKFFSWQALGGHQNAH 49
                    99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MGSSSSTDKN DEEAELEQAD QGLVRVYSCN YCRRKFFSWQ ALGGHQNAHK RERTLESRDR  60
LHRISAAAAS FRYAKMRNHQ HALSTSVASL PLHHVHAGCL SNNILLNVQA HSAFNKPTSS  120
LQSNSSRFNL YGQHHQERLS SSRLPVNDHQ PAILQLPTFV HGSAQQHNDG LLGRSFQLQG  180
TDAGLKGNNS SNQAYIDLAL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.17e-23C2H2 family protein