PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026438440.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 145aa    MW: 16131.7 Da    PI: 10.2675
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026438440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87.4e-191852135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+t+kTplWR gp g+k+LCnaCG+++rkk++
  XP_026438440.1 18 CVDCKTSKTPLWRGGPAGPKSLCNACGIRQRKKRR 52
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MLDLTEKGSG SDTTVKSCVD CKTSKTPLWR GGPAGPKSLC NACGIRQRKK RRAALGLQKE  60
ESDEMIKKEK KEDHHHHHKI QISNKKNKSN NKIIGAYLRL RLLAFGREVM LQRSAAMGST  120
QRQPLGEEEQ AAVLLMALSC ESVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14888RKKRRAALGLQKEESDEMIKKEKKEDHHHHHKIQISNKKNK
24971KKRRAALGLQKEESDEMIKKEKK
34989RKKRRAALGLQKEESDEMIKKEKKEDHHHHHKIQISNKKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-33GATA family protein