PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026438809.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Nin-like
Protein Properties Length: 352aa    MW: 40153.6 Da    PI: 4.2182
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026438809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK66.15.6e-21260308250
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 
                     +  ++l+dl + F+ pi+ +AkeL++c+Tv+K++CR++G+kRWP+R + 
  XP_026438809.1 260 TRALTLNDLTRRFHVPINTVAKELQICTTVIKKKCREFGVKRWPSRAVI 308
                     5789******************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MPDVEEDPLD MDDVVAQYFQ ECNPTLNLDD PGLDELLNGN LQHNDGDQFD YWDTENPVMN  60
DDNDYNFNNS PNLDFTTNGV EGENPEYVGN VGDEVETNSV VPFPVWPPVP TPFNCSYCHV  120
LREIIHENGA NSMKLEIHGR IGFICHAIYE MQTNVIDGPP IVNYEMVDFT MQSMESVKQF  180
IVQYCQSRTQ EGYVLLPDPL SVYYDALCYG LNWFNNVDSD ELNPPSEASH IGAEEENRTP  240
ANTNDTRTPR PGLASQRQRT RALTLNDLTR RFHVPINTVA KELQICTTVI KKKCREFGVK  300
RWPSRAVISK TKKLLMLETS LRDGNGNRNT NSEIETLRKQ LEDIYACRDV DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.15e-11Nin-like family protein