PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439295.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 207aa    MW: 23358.6 Da    PI: 6.5153
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.79.6e-16959150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeys 50
                    +ri +  +r vtfskRr+gi  KA EL+ L  d+ v++i+fs+ gk y++ 
  XP_026439295.1  9 ERIVDPQKRMVTFSKRREGIKSKATELCRLfADIIVCIIVFSPGGKAYTFT 59
                    5788999*********************8868*****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGQKKIEIER IVDPQKRMVT FSKRREGIKS KATELCRLFA DIIVCIIVFS PGGKAYTFTN  60
SPVGVCNMVQ RFLEEQRKGK KQESENVHRS KNSTQCRNKA GVGNGSIDSF WWDNIDNEEL  120
DSVEKLKSVK QSLEKLKQNL CARKEVLIAS SSSSSSSTIE DLIIDEDCII EDRIVEDAAT  180
TITEKHEARE ACCKDQPNLD LSLNLGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61120.12e-13MIKC_MADS family protein