PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439517.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 424aa MW: 47627.9 Da PI: 9.6142

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.3	3.3e-14	63	151	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp kf+ + ++k +++ tl de+g++++ ++ + ++ l++GW +F+ka++L gD +vF+l++ s f ++ XP_026439517.1 63 FIKLMVRSHVSGCYWLGLPSKFCLSS-LPK-NDTIFTLVDEDGEEYTANY--LPR--KFGLSGGWGGFAKAHKLAPGDALVFHLIKISIF--KIY 149 89*******************777.333.55689**********..554..588*********************9987777..555 PP EE CS B3 96 vf 97 ++ XP_026439517.1 150 IV 151 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MKRKQKMQTS SAMVIMDYSL SKVVGSPKKK KARLMTKVEN RKTLTEEQAE VVQSSLDPTC 60 PSFIKLMVRS HVSGCYWLGL PSKFCLSSLP KNDTIFTLVD EDGEEYTANY LPRKFGLSGG 120 WGGFAKAHKL APGDALVFHL IKISIFKIYI VRTQALAEVD AAQDLRKLES NMEGSDTGGK 180 NMKKSRKRAQ KGVSSHSPVV LLSKDQNVTL PLAGSDQPED RSSTEVINSE VLQDIKHLGS 240 VGESREIKNF ESFTISVNNL TIDSEIPEHV RAKYFELCRS QNTFLHENLM VSLNPKLVAG 300 MISEIVDLAD AIRASTVSTL RKEFETWEHS LKAFKQLGMN VGFLLSRVGK LLKLVSESEK 360 AFDLKRYNEA MNGKNRVKGE ITTLEMQILE LKNESMRLDM EIKTLKLQAE KHETTFKSEV 420 NSPW

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MKRKQKMQTS SAMVIMDYSL SKVVGSPKKK KARLMTKVEN RKTLTEEQAE VVQSSLDPTC  60
PSFIKLMVRS HVSGCYWLGL PSKFCLSSLP KNDTIFTLVD EDGEEYTANY LPRKFGLSGG  120
WGGFAKAHKL APGDALVFHL IKISIFKIYI VRTQALAEVD AAQDLRKLES NMEGSDTGGK  180
NMKKSRKRAQ KGVSSHSPVV LLSKDQNVTL PLAGSDQPED RSSTEVINSE VLQDIKHLGS  240
VGESREIKNF ESFTISVNNL TIDSEIPEHV RAKYFELCRS QNTFLHENLM VSLNPKLVAG  300
MISEIVDLAD AIRASTVSTL RKEFETWEHS LKAFKQLGMN VGFLLSRVGK LLKLVSESEK  360
AFDLKRYNEA MNGKNRVKGE ITTLEMQILE LKNESMRLDM EIKTLKLQAE KHETTFKSEV  420
NSPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-38	B3 family protein