PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439533.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1050aa MW: 116579 Da PI: 5.827

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.4	9.2e-10	914	962	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+++v q+G g+W+ I r + +Rt+ ++k++w+++l XP_026439533.1 914 VWTLSEVMKLIEGVSQHGVGRWTEIKRLLFpssAHRTAVDLKDKWRNLL 962 6*************************999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1050 aa Download sequence
MAIKQNFFLL SFSFPPHSHT LSAVLLLSGC LRAFWPFCFP PPLLRQFSDS TQRKMLGNWE 60 ENGNSWTMIE NSSMPASGEV VAGGITYNNA LVEGDGICDP ASEDEITEMK DLLAEPESVK 120 ISMDALLYCN NEYLEKCLGT GDVLGSAHQN NHLKSYTGTM QSDIPLYHND LVNANGVREE 180 DLHVTGGLSS ASNELILDTK YIARFSNLEY TCEGLHSVNL SLETCSPGLG GRVSDSSEAL 240 DLSAGTMNLL PESTSDQNVL LLDKLTTHEL QLAYRGIFCL ETTVKDRDWL FSRISLGLQN 300 FIMENGPGFL ERETSSTECE DTHLKCSNDS HGTNSSFESC SPGLSEWVAD GAQALDLSAG 360 TVNPVPVSTS DQNFLILDKL TTHELHLAYR GIFGLETTVK DRKWLLSRIS LGLQNFIETE 420 NGPAFLERET SFTQREDMHL KCSDDSHGKN SSFENSPGLS ERVTDGAEAI NLSAATINSV 480 PESTSDQYAL LFDNMTIHEL HQAFRSTFGL ETAVEDRKWL ISRISLGMQK FIEAEDCSIF 540 LESRVSSAKH EDMPLRCNND SHGNNSSKSC SSGLSERLTD GGETLDLSAG TIPVSESTSD 600 QNGHLLDKLT TQELQYAFKS TFDLETTVED RKWLINHILI GLQNFVEMEN VSGFLEREIS 660 FTNHVDVQLR CSNDSLGTDS SFVDTKNVSG FPEREVSSTK HVDMHVRCSD DSLGTDSSFA 720 SVVGNWAKSL CSSQTEKVTS LDVYTTSHSK VNDTGFGLMS WRNGGAVKKR KRSRKPTRGF 780 IEASDLKSRY CIEKLENRIT SSKDKLNELS NQNLLNGVVD MASNCKQDTS GDSDSQVTCG 840 RWKAKRFAKK NTSVRVHEHD PGDNKNDRSC CDPEHSSDLE SSHREWQDDM SESDDGIMTV 900 STRKDPSRRK NHRVWTLSEV MKLIEGVSQH GVGRWTEIKR LLFPSSAHRT AVDLKDKWRN 960 LLKASGAKLK NKRKDYIGQK GSQPIPESAL KRVKELAIIH LYPRPCQSKH TSSRTSKLVN 1020 TALQSPSNHA ASNSDTTVCR RGRTHRKSIT

Sequence ? help Back to Top

Protein Sequence Length: 1050 aa Download sequence

MAIKQNFFLL SFSFPPHSHT LSAVLLLSGC LRAFWPFCFP PPLLRQFSDS TQRKMLGNWE  60
ENGNSWTMIE NSSMPASGEV VAGGITYNNA LVEGDGICDP ASEDEITEMK DLLAEPESVK  120
ISMDALLYCN NEYLEKCLGT GDVLGSAHQN NHLKSYTGTM QSDIPLYHND LVNANGVREE  180
DLHVTGGLSS ASNELILDTK YIARFSNLEY TCEGLHSVNL SLETCSPGLG GRVSDSSEAL  240
DLSAGTMNLL PESTSDQNVL LLDKLTTHEL QLAYRGIFCL ETTVKDRDWL FSRISLGLQN  300
FIMENGPGFL ERETSSTECE DTHLKCSNDS HGTNSSFESC SPGLSEWVAD GAQALDLSAG  360
TVNPVPVSTS DQNFLILDKL TTHELHLAYR GIFGLETTVK DRKWLLSRIS LGLQNFIETE  420
NGPAFLERET SFTQREDMHL KCSDDSHGKN SSFENSPGLS ERVTDGAEAI NLSAATINSV  480
PESTSDQYAL LFDNMTIHEL HQAFRSTFGL ETAVEDRKWL ISRISLGMQK FIEAEDCSIF  540
LESRVSSAKH EDMPLRCNND SHGNNSSKSC SSGLSERLTD GGETLDLSAG TIPVSESTSD  600
QNGHLLDKLT TQELQYAFKS TFDLETTVED RKWLINHILI GLQNFVEMEN VSGFLEREIS  660
FTNHVDVQLR CSNDSLGTDS SFVDTKNVSG FPEREVSSTK HVDMHVRCSD DSLGTDSSFA  720
SVVGNWAKSL CSSQTEKVTS LDVYTTSHSK VNDTGFGLMS WRNGGAVKKR KRSRKPTRGF  780
IEASDLKSRY CIEKLENRIT SSKDKLNELS NQNLLNGVVD MASNCKQDTS GDSDSQVTCG  840
RWKAKRFAKK NTSVRVHEHD PGDNKNDRSC CDPEHSSDLE SSHREWQDDM SESDDGIMTV  900
STRKDPSRRK NHRVWTLSEV MKLIEGVSQH GVGRWTEIKR LLFPSSAHRT AVDLKDKWRN  960
LLKASGAKLK NKRKDYIGQK GSQPIPESAL KRVKELAIIH LYPRPCQSKH TSSRTSKLVN  1020
TALQSPSNHA ASNSDTTVCR RGRTHRKSIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	768	773	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-25	MYB_related family protein