PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439745.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 246aa MW: 28883.3 Da PI: 6.5203

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ v+++G ++W+tIa+ g++R++k+c++rw +yl XP_026439745.1 17 KGPWLEEEDERLATFVTLMGERRWDTIAKVSGLRRSGKSCRLRWMNYL 64 79********************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	72	115	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +eE+ +++++ +++G++ W++Iar+++ gRt++++k++w+++l XP_026439745.1 72 QMNAEEERIILQLQHRWGNK-WSKIARKLP-GRTDNEIKNYWRTHL 115 6789**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MAMVYQSVVV QEELIRKGPW LEEEDERLAT FVTLMGERRW DTIAKVSGLR RSGKSCRLRW 60 MNYLRPDLKH GQMNAEEERI ILQLQHRWGN KWSKIARKLP GRTDNEIKNY WRTHLRKKTQ 120 TEEQEKDKAA KDAPQPDFLQ QRDVDHSEKR TWIEHEVYAQ EDIMRPPEHS FDVSGLSPRN 180 VLAYSPYENH ILDWISSSES VSLNDNNVLK HNGQCGISSS DSWFNIAADS SILDFTSISL 240 WENDKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	2e-59	MYB family protein