PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439825.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 482aa    MW: 54021.4 Da    PI: 6.4662
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.4e-1557147199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k + +s+v+   ++ lp  f++ +   + ++++ltl de+g+++ vk+     +  + l++GW++F  a++L egD vvF+l++ ++f  +v 
  XP_026439825.1  57 FIKLMRRSHVSGCFWMKLPSAFCNPNL--PSRDIDLTLLDEEGEEYMVKC--LAPK--FSLSAGWRGFSLAHKLAEGDAVVFHLIEAHKF--KVY 143
                     8999*******************6663..46889****************..4444..78*************************98888..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_026439825.1 144 IVRA 147
                     7775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MKVKKEIPTS LTKVVTNSFK KKSRGTRLLT MIGKPKSPIL DKAEKIQTGL SPNYPSFIKL  60
MRRSHVSGCF WMKLPSAFCN PNLPSRDIDL TLLDEEGEEY MVKCLAPKFS LSAGWRGFSL  120
AHKLAEGDAV VFHLIEAHKF KVYIVRARGL ADVDLPHFLP NNDIPAQGSV QDGAGATERM  180
ITKKCTEKYQ VSHSAVPISG EDQHTEVMDT SSAENRGKVM NAANKSSAEN CTQSHPSAPF  240
LGGDKNSNLA PPRMNATNRS PAKNCTESHH SDTDDQNHNL EQLEENGSVE AMDTEVSEDV  300
GLLEPIAGIQ EFTNFDSFSI IVNDMLIDHE ISEDVRSKYY ELCRSQKAYL HNHLMEGINR  360
KMVTLIISDI VNIADAVRAI KLSTPKDIFE VWEKSLKFYK HVGMNVDFLL SRVGIHLQQA  420
LAFDYNGAVI EENRLKEEIT SREAKILELR NDSMSLEREL TTLEGNREKH EAAFQSMVNS  480
PW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.16e-37B3 family protein