PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439866.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 756aa    MW: 85331.2 Da    PI: 5.8427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS385.94.8e-1183837541374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+avs++d + a++lL ++++++sp+gd  qRla++f+++L+arla+s+se+y++l  ++ts    ++ l+a++lf  + P+ k+s+
  XP_026439866.1 383 LRTLLIHCAQAVSADDRRTASELLRQIRQHSSPNGDGSQRLAHCFANGLEARLAGSGSEIYSTLLHKRTS---AADILKAYHLFMGTVPFKKISN 474
                     6789************************************************************999998...8********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aNq+I + +++++++Hi+Df+i +G+QWp+L+q L++R++gpp++RiTg++ pe+g   +e +eetg+rL+++Ae+++vpfe+++ +a+++e+
  XP_026439866.1 475 FFANQTIDDLADKATTLHIVDFGILYGFQWPCLIQRLSKRKGGPPKIRITGIELPEPGfrPSELVEETGRRLKSYAEKFHVPFEYHA-IAQKWET 568
                     *********************************************************9*9999************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L++ ++E+l+Vn+ ++  +llde+v l+s+r++vL+l+++++P+v+++  ++  ++s+ F++rf ea+ ++s+lfd l++++pre+ eri
  XP_026439866.1 569 IQLEDLNIAKDEVLVVNFLFRARNLLDETVILDSPRNAVLNLIRKMNPDVFIHGVSNGAYSSPFFVTRFREAFFHFSSLFDVLDTNIPREHPERI 663
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Er +lg+e+ n++aceg++r+er et+++W++r ++aGF ++pl ++++k+ak  ++  + + + v+ +s++++lgWk+r L+++S+Wr
  XP_026439866.1 664 LIERDILGKEALNIIACEGSQRVERPETYKQWQARNTRAGFVQLPLHKDIMKKAKERVKSDYHKDFIVDADSQWMLLGWKGRILFALSSWR 754
                     ************************************************************99888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MDMDSRLRGL LDSINGNTES VSDMNFFRSE ENHNNNSLDQ NSIDQNPNFS GSSNSFADSS  60
MTASSSNFSL QEDISPGEEY DFSDVVLKYI TQMLMEEDIE EKNCMLQDCS ALLATEKPFY  120
EILGEKYYPP SPHHYNPESQ RDNSARYHGG NNSSSSGTSS NNAAETSWAG ALGEYQPLSH  180
TRSVPSDYTF QMTPQSSFNP SNGSNSVIEG KVDSPGDKVQ VHDVYSESDF IWQFRKGVEE  240
ANKFLPDDTN LIIDLESNSF LNDERNKEAG DVEVKLEKKD EKENSPTGSR GKKNLYREDT  300
GLEEGRSNKQ PAVFSEETVR SAMFDMVLLC GNEEKCDKED STPHKSLKTE ATKNLQQNGQ  360
SKGSNGGKPR GRKQKSKGDV VDLRTLLIHC AQAVSADDRR TASELLRQIR QHSSPNGDGS  420
QRLAHCFANG LEARLAGSGS EIYSTLLHKR TSAADILKAY HLFMGTVPFK KISNFFANQT  480
IDDLADKATT LHIVDFGILY GFQWPCLIQR LSKRKGGPPK IRITGIELPE PGFRPSELVE  540
ETGRRLKSYA EKFHVPFEYH AIAQKWETIQ LEDLNIAKDE VLVVNFLFRA RNLLDETVIL  600
DSPRNAVLNL IRKMNPDVFI HGVSNGAYSS PFFVTRFREA FFHFSSLFDV LDTNIPREHP  660
ERILIERDIL GKEALNIIAC EGSQRVERPE TYKQWQARNT RAGFVQLPLH KDIMKKAKER  720
VKSDYHKDFI VDADSQWMLL GWKGRILFAL SSWRPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein