PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026439898.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 277aa    MW: 31372.9 Da    PI: 9.6578
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026439898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.6e-13125169347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + k++G+g+W+ I+r     Rt+ q+ s+ qky
   XP_026439898.1 125 PWTEEEHRLFLLGLKKYGKGDWRNISRNYVISRTPTQVASHAQKY 169
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEILSQASYP NLFLGENKSY GRGWTPKENK LFENALAVFD KETPDRWQKI ADMIPGKSVM  60
DVLRQYKELE DDVSQIEAGS YPIHSPYSSF TLEWVNNSRT YGGSGGGGKR PPSGRADQER  120
KKGVPWTEEE HRLFLLGLKK YGKGDWRNIS RNYVISRTPT QVASHAQKYF IRQLSGGKDK  180
RRSSIHDITT VNCIEGTTLA DNHRPHSEDQ STFLAQSNMG FTPKPVFDWN QTNNGASMVF  240
NQNNVNFFGQ SPYGMGSYGM KQHGQNMHRN GFHGSHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.17e-72MYB_related family protein