PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440088.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 511aa MW: 57695.2 Da PI: 5.7693

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.7	1.6e-16	83	172	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+++ps+v++ +l lp +f++ + ++k e+++ltl de+g++ +vk+ + ++ l++GW F + ++L +gD vvF+l++ ++f +v XP_026440088.1 83 FIKIMLPSHVSNGFWLGLPATFCSLN-LPK-EDFDLTLLDEDGEEHTVKC--LPR--KFGLSGGWGTFSRVHKLAAGDAVVFQLVEATKF--KVY 169 89*******************555.564.679************..554..588*********************9987777..888 PP EE- CS B3 96 vfr 98 ++r XP_026440088.1 170 IVR 172 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MEGKQKIPKG RFLKRMTRSS TKETDSSLTK VVPQQVVHNP TKEKKRTRSK TLLTATEDHR 60 NKSLAQVGAE EIQSSLNPKY PSFIKIMLPS HVSNGFWLGL PATFCSLNLP KEDFDLTLLD 120 EDGEEHTVKC LPRKFGLSGG WGTFSRVHKL AAGDAVVFQL VEATKFKVYI VRGTRGLACD 180 IPEEGSDIAD HSDAKERNKR KRVSSHPTVP LPGEDQDSVL SLPEDCNEME MTKRRGQKQI 240 KSDPSVPLHG EDRDVTLPLE SSIQPDDNGN NEVEIDLNIM LSPESSRQPE GRSDEEVIDR 300 NITLLLASSR QLDDHSSEEV IDSEVLERIK FSDSTFEVQD VTNLESFTIV VNGLIIDSEI 360 SANVRTKYYE LCCSQKTHLH RHLIQGMNSK LVAGMICETV NIADAIRGSK LSTPKDEYKA 420 WQKSLIGFKH LGMNVEFLLS RLDMLLKLAL ESEHALEYNE QDRAKEEELS TLEKRILELR 480 NESTRLEKEV ETLKVNAEKH EAFHNVVNSP W

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MEGKQKIPKG RFLKRMTRSS TKETDSSLTK VVPQQVVHNP TKEKKRTRSK TLLTATEDHR  60
NKSLAQVGAE EIQSSLNPKY PSFIKIMLPS HVSNGFWLGL PATFCSLNLP KEDFDLTLLD  120
EDGEEHTVKC LPRKFGLSGG WGTFSRVHKL AAGDAVVFQL VEATKFKVYI VRGTRGLACD  180
IPEEGSDIAD HSDAKERNKR KRVSSHPTVP LPGEDQDSVL SLPEDCNEME MTKRRGQKQI  240
KSDPSVPLHG EDRDVTLPLE SSIQPDDNGN NEVEIDLNIM LSPESSRQPE GRSDEEVIDR  300
NITLLLASSR QLDDHSSEEV IDSEVLERIK FSDSTFEVQD VTNLESFTIV VNGLIIDSEI  360
SANVRTKYYE LCCSQKTHLH RHLIQGMNSK LVAGMICETV NIADAIRGSK LSTPKDEYKA  420
WQKSLIGFKH LGMNVEFLLS RLDMLLKLAL ESEHALEYNE QDRAKEEELS TLEKRILELR  480
NESTRLEKEV ETLKVNAEKH EAFHNVVNSP W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	6e-35	B3 family protein