PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440089.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 255aa MW: 29273.8 Da PI: 9.769

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.9e-10	28	73	1	44
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r +W +d+l+ +av+ ++ g +W++Ia++++ g+t+ ++++++ XP_026440089.1 28 RTPWPRSLDKLFEQAVAIFPEGtpdRWRKIAAHVP-GKTPWEIREHY 73 6789999**************************.********9 PP
2	Myb_DNA-binding	41.9	2.3e-13	137	181	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W++I+r Rt+ q+ s+ qky XP_026440089.1 137 PWTEEEHKLFLIGLKRYGKGDWRSISRNAVMSRTPTQVASHAQKY 181 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MFQEDFMMMG SNYLPSAMQQ SSQFYSSRTP WPRSLDKLFE QAVAIFPEGT PDRWRKIAAH 60 VPGKTPWEIR EHYEALIHDV TEIDSGRVEL PRYEDDYAGN NVSFSKTWGS DSGRRSNQIS 120 FASKSKNNTE ERKKGIPWTE EEHKLFLIGL KRYGKGDWRS ISRNAVMSRT PTQVASHAQK 180 YYLRLNSMKK EKKRSSIHDI TTVETRTVPP PQNDQSKVGS ASDSSMKMGM SIDLPRSFFD 240 QGYSSSGYQQ LGYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	7e-72	MYB family protein