PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440113.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 491aa    MW: 56045.1 Da    PI: 4.344
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS120.81.7e-371314915374
            GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                     L +  ea+++++ elaq +  r+ + +s  g++++R a y+ +A +++  +         +   +++++  e   ++k+++++ P+ kf+h+ aN
  XP_026440113.1 131 LKAYSEAIENEQPELAQVISRRVIDKVSFFGTTVERFAYYLFQAFETHGDS---------NYLLQESYKNYE--VIFKAWYQILPYGKFAHFSAN 214
                     666789****************************************99888.........222222222334..45678**************** PP

            GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                     +aIlea+  + e vHiiDf++++G+QWp+ ++a+ +    +  ++iT ++s   + + + eet++rL ++A+++g++++ + +   +le+l  e 
  XP_026440113.1 215 NAILEAIPMDtEVVHIIDFNLGEGIQWPPVIEAIGK----QVLVKITSLKS--IDGEWRFEETKKRLDDYAKAFGLNLKVKEM---ELEQLVNEV 300
                     *******9986888*******************987....589********..559*************************98...677776677 PP

            GRAS 194 Lrvkp....gEalaVnlvlqlhrlldesvsleserdevLklvksl........sPkvvvvveqeadhnse....sFlerflealeyysalfdsle 272
                     +++k+    +E  a n+++ l ++ +++  ++   +e+L++ k+l           v+++ + e   +s      F   f        al++s+e
  XP_026440113.1 301 MKMKEigegKEFFAFNCIVGLPHTGRRKPRQQ--VNEFLWVAKELvripfgdsTCGVITFGDGEFYEESVegclGFGSFFDMNSAKSHALLESIE 393
                     777777779***************95554444..59*******9933233222234555555554433331222333333333334445556665 PP

            GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWre.....rleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgsl 358
                     + +p +  e+r+ +E  +++++++                ++kW+e     r+++ G++ v+ls ++  + k l+r+ +   y+v+   e+s+ +
  XP_026440113.1 394 SHFPCHLrEARMAIECLFVAPNLCAQDW------------FSKWEEsreelRFSQLGLNGVRLSRENLVETKELVREGE-SLYEVKvegENSNVM 475
                     5566554466666666666655544433............444433222239*************************99.336666558889999 PP

            GRAS 359 vlgWkdrpLvsvSaWr 374
                     vl  ++ pLv +S+Wr
  XP_026440113.1 476 VLEFRGTPLVKFSSWR 491
                     9**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MDIFHMGDCN LTSPATSSDS ESSNDVFTAA NYPTMGNIAS FLFSPDRTSV NLELEEFNPT  60
EFSDVLEWME ESENSFPSQQ HFFEEESPKA SENSSIMNSS EVSSISNQPS LLVFPNENME  120
VDSQLTIPPL LKAYSEAIEN EQPELAQVIS RRVIDKVSFF GTTVERFAYY LFQAFETHGD  180
SNYLLQESYK NYEVIFKAWY QILPYGKFAH FSANNAILEA IPMDTEVVHI IDFNLGEGIQ  240
WPPVIEAIGK QVLVKITSLK SIDGEWRFEE TKKRLDDYAK AFGLNLKVKE MELEQLVNEV  300
MKMKEIGEGK EFFAFNCIVG LPHTGRRKPR QQVNEFLWVA KELVRIPFGD STCGVITFGD  360
GEFYEESVEG CLGFGSFFDM NSAKSHALLE SIESHFPCHL REARMAIECL FVAPNLCAQD  420
WFSKWEESRE ELRFSQLGLN GVRLSRENLV ETKELVREGE SLYEVKVEGE NSNVMVLEFR  480
GTPLVKFSSW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.15e-16GRAS family protein