PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440133.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 485aa    MW: 54243.3 Da    PI: 8.6516
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.8e-1557144298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+v +  +l l  kf+++  ++   ++++tl  e+g++++ ++    +  ++ l++GW++F+ a++L egD +vF+l++  +f  +v +
  XP_026440133.1  57 VKLMLRSHVVQGFWLGLTSKFCSRLPKN---DTEVTLVGEDGEEYTANY--LSH--KFGLSGGWRGFATAHKLVEGDALVFQLVEAAKF--KVYI 142
                     68999*****************988544...568***************..555..588***********************9876666..8887 PP

                     E- CS
              B3  97 fr 98 
                     +r
  XP_026440133.1 143 VR 144
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MKSSSAMVTT QSLPKVIASG KKNDVRLMTE VEKPKSLVEV RAEEIQFGLD PQFPSLVKLM  60
LRSHVVQGFW LGLTSKFCSR LPKNDTEVTL VGEDGEEYTA NYLSHKFGLS GGWRGFATAH  120
KLVEGDALVF QLVEAAKFKV YIVRAHSLAN VEVASSLLKS GIPAKGGDQA DAEERKTGIK  180
YTRKHILCRP AVPLIGEDQH TVPPLKSCKE MKMNKSPAQK HVKSHLSVPF LGDDQDATLP  240
IAGPKETTAT DDPIRKRVKF HPSVLHLGGD QNVTLPLSSS KQPEDQSNRK VIDTEVLEGT  300
KLSDSSVEIQ DVTDFESFTI TVNGLIIDPK MSENYRSKYY ELCRSQKTYL HKNLMQGVNS  360
KLVAGIICET VDIADAIRAS ELGTPKDDFK AWRKSLIGFK HLGMNADVLL SRIDILLKLV  420
MDTEDSFDKN ETMVRRNRVK REIAALDMKI LELRNESVRL EREVKALQVN EEKHEAFYSV  480
VRSPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1435442RRNRVKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-35B3 family protein