PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440174.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 346aa MW: 39605.3 Da PI: 7.4027

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	105.3	3.2e-33	107	205	1	99
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 f+k ltpsdv+k++rlv+pk++ae++ gg + l+++desg+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++ +r ++++ XP_026440174.1 107 FEKPLTPSDVGKLNRLVIPKQHAEKYlplGGH---DSLLSFKDESGKDWRFRYSYWNSSQSYVLTKGWSRFVKEKHLDAGDIVMFQR-RRfDGER 197 99***********************98544...237********************************************6.5669999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ XP_026440174.1 198 LFIRWRRR 205 ****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MSRNTQFYTQ LPHEGLYGTQ PIMDHHQSHL IVPDHHNQQR LHHWGSSASN QNQNQVVWYS 60 QEAARTQQSV ISDDEEGEES GGGGGGGGRA GTNEVVEIEE EEREHMFEKP LTPSDVGKLN 120 RLVIPKQHAE KYLPLGGHDS LLSFKDESGK DWRFRYSYWN SSQSYVLTKG WSRFVKEKHL 180 DAGDIVMFQR RRFDGERLFI RWRRRNSPTP TAATTTGDDH QFCSSRSSLQ VVPNSNTSNC 240 NSNSSSSTTT NSTWNQANFY PNIQQQHYQY HHHHHQQQHH HGPPSYPSTP LHQHHNHHVP 300 LLYQSPYLHA VGHNKDEAAV DEKMKIAAGG NSKKFRLFGV NLDLPN

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MSRNTQFYTQ LPHEGLYGTQ PIMDHHQSHL IVPDHHNQQR LHHWGSSASN QNQNQVVWYS  60
QEAARTQQSV ISDDEEGEES GGGGGGGGRA GTNEVVEIEE EEREHMFEKP LTPSDVGKLN  120
RLVIPKQHAE KYLPLGGHDS LLSFKDESGK DWRFRYSYWN SSQSYVLTKG WSRFVKEKHL  180
DAGDIVMFQR RRFDGERLFI RWRRRNSPTP TAATTTGDDH QFCSSRSSLQ VVPNSNTSNC  240
NSNSSSSTTT NSTWNQANFY PNIQQQHYQY HHHHHQQQHH HGPPSYPSTP LHQHHNHHVP  300
LLYQSPYLHA VGHNKDEAAV DEKMKIAAGG NSKKFRLFGV NLDLPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11580.2	1e-50	B3 family protein