PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440399.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 209aa MW: 24568.7 Da PI: 7.1965

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.5	4.9e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ien++ rqvtfskRrng+lKKA+ELSvLCdae+a+i+fsstgklye+ss XP_026440399.1 10 KIENTTSRQVTFSKRRNGLLKKASELSVLCDAEIALIVFSSTGKLYEFSS 59 69**********************************************96 PP
2	K-box	71	3.5e-24	75	158	8	91
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 + ++++++l+ e+a+L keienLq++qR+l+Ge+Les+s+ eLq e+qLe sl +iR+kKn+l++eqie+l+++ qee+ XP_026440399.1 75 KEVQENSQQLKYEAANLAKEIENLQTSQRKLMGESLESCSVDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEEQ 158 334667899******************************************************************988887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MGRGKTVMRK IENTTSRQVT FSKRRNGLLK KASELSVLCD AEIALIVFSS TGKLYEFSST 60 TSMQKTIERY QKYNKEVQEN SQQLKYEAAN LAKEIENLQT SQRKLMGESL ESCSVDELQT 120 AETQLEMSLL NIRTKKNQLY REQIEQLKQQ HMTFQEEQLL EENEVLWEKC RSRQWEQQNQ 180 QTEMALPYET SPNSQEVETK LQIGRPERR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	2e-61	MIKC_MADS family protein