PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440619.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 333aa    MW: 38354.5 Da    PI: 10.3786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.82.9e-16105195199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k + +s+v +  +l +p +f++++  k  +++ + le+ +g+++e ++   ++s  y l++GW  F+ a++L +gD +vF+l+++ +f  +v+
  XP_026440619.1 105 FIKSMRRSHVYQGFWLNVPSEFCNKYLDK--KTFNIWLENAEGKEYETNF--IGTS--YGLSGGWGTFALAHKLHDGDALVFQLIDKIRF--KVH 191
                     89************************666..4678***************..6666..88************************986666..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr 
  XP_026440619.1 192 IFRG 195
                     9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MATGDNTINH SYEKEREKHF EENERRFKAW GVAKKARSRS LIAKKNSAVV FVNDRPQNFF  60
LKSATSSKRP RQLYQKVATN EERAETLKQA MSLQRCLESA GHHCFIKSMR RSHVYQGFWL  120
NVPSEFCNKY LDKKTFNIWL ENAEGKEYET NFIGTSYGLS GGWGTFALAH KLHDGDALVF  180
QLIDKIRFKV HIFRGSNDAG EGNAENLKTD REIISDKEDV ELGNSSKYED CDSDVVADNS  240
KEEKATNPAR KTKGSTSRRL QPGRSSKQLA QPIIHAEVSK KRQREVAERK KPVQKRKMKE  300
KLLTKKPFDI SQVTYFRQII KNLYKKVPLV TNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280291KKRQREVAERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-31B3 family protein