PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440686.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 201aa MW: 22251.6 Da PI: 9.6692

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440686.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	5e-05	12	69	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC.........TTS-.STCHHHHH..HHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas......kapskK.lsKaeiLe..kAveYIksL 54 + +E++RR +++ ++L +l+ ++s k +s K + K +i++ A YI++L XP_026440686.1 12 KTIEKNRRIQMKALCFKLVSLITPNSstivpqKHSSNKdVCKPQIVQfdNAAAYIQEL 69 579*********************6669999966666669999999744699999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
SNTGKSGTID RKTIEKNRRI QMKALCFKLV SLITPNSSTI VPQKHSSNKD VCKPQIVQFD 60 NAAAYIQELR KRIDELKRKK QGMIHGGEQE IISINSSTST SSSSSTSTMT GTNLPGANLP 120 ILEVKDFEDA MVVVVVTGLN KNFMFYELIT ILEEHGAEVV SASFATVSDK VYHTIHSQVR 180 CSRLGVETTK ICDRLKKLVY A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	2e-27	bHLH family protein