PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440694.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 274aa    MW: 31659.6 Da    PI: 8.9734
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.7e-151764148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W ++Ed+ll ++++++G  +W  ++ + g++R++k+c++rw++yl
   XP_026440694.1 17 KGPWDEDEDLLLRKCIEKHGASRWGQVPLKAGLNRCRKSCRLRWLNYL 64
                     79********************************************97 PP
2Myb_DNA-binding41.92.3e-1370115148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l
   XP_026440694.1  70 RGEFEADEVDLIARMHKLLGNR-WSLIAGRVP-GRTANDIKNFYNTHL 115
                      79999*****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEKNSSLVLS SAEGLKKGPW DEDEDLLLRK CIEKHGASRW GQVPLKAGLN RCRKSCRLRW  60
LNYLDQNIKR GEFEADEVDL IARMHKLLGN RWSLIAGRVP GRTANDIKNF YNTHLKKKCF  120
SKQSQLQKNK QQKRRRPLRP NTEDSHMTVT KVLRPQPRTF SKTSHCIINK ESTPVAGMPN  180
DNMHNNLNTT TARLLEDSND HGDQLTKSSL SSIVNDLDRF SSKNVSSSDD YYCNFDDDQR  240
LKEVGDYLNN DDLYLIDDLW RMLGENQDGQ YLTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116136KKKCFSKQSQLQKNKQQKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.15e-55MYB family protein