PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440705.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 279aa MW: 32342.6 Da PI: 5.6381

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.5	4e-12	87	159	2	57
T--SS--HHHHHHHHHHHH.................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFe.................knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r+++++++eq ++Le+ F+ ++ ++ e++ +L+++l+L rq+ +WFqNrRak k+ XP_026440705.1 87 RRKRRLSSEQADALERSFQeeieleqqpgttlderkNKVKLEPERKMRLSRELELHPRQIAIWFQNRRAKLKR 159 455589*************************997799*****************************997 PP
2	HD-ZIP_I/II	80.7	2.2e-26	123	195	20	92
HD-ZIP_I/II 20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++ kLeperK++l+reL+l+prq+a+WFqnrRA+ k k++E+ y++L++ ++ +++en++L++ev +L+++l+ XP_026440705.1 123 NKVKLEPERKMRLSRELELHPRQIAIWFQNRRAKLKRKKIEQLYNVLQQDFEIVARENQHLQEEVMKLKSKLD 195 455******************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MANSNYCCST PQIPSPTTTT SGQQQENYVS SFLHDHHYHC ESFDHPFPGL VGAEMTELWS 60 SRADECKAEN GVEDHDANIN NQVKTGRRKR RLSSEQADAL ERSFQEEIEL EQQPGTTLDE 120 RKNKVKLEPE RKMRLSRELE LHPRQIAIWF QNRRAKLKRK KIEQLYNVLQ QDFEIVAREN 180 QHLQEEVMKL KSKLDNRETM QASTRYEAQA SPAEANGDKV ATEITRLSAA IQSTDDIQGR 240 TSDSNHISEY STYLFDNENY YSTTSLPYWD VSQGYPKFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	159	NRRAKLKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36610.1	5e-33	HD-ZIP family protein