PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440732.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 232aa    MW: 27032 Da    PI: 10.2478
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.16.6e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrngilKKA+ELSvLC+ae+a+iifs+tgkl+e+ss
  XP_026440732.1 10 RIENATSRQVTFSKRRNGILKKAYELSVLCEAEIALIIFSPTGKLHEFSS 59
                    8***********************************************96 PP
2K-box72.41.3e-241011831698
           K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +l++e+a+L k+ie+L+ ++R+l+Ge+Les+s++eLq  e+qLeksl  iR++K++l +++ie+l++kek+l een+ Lr++l
  XP_026440732.1 101 HLKHEAANLAKKIESLEVSKRKLMGEGLESCSINELQTTENQLEKSLLIIRERKHQLHRKKIEQLKQKEKQLLEENEVLRERL 183
                     789****************************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGRGKTEMRR IENATSRQVT FSKRRNGILK KAYELSVLCE AEIALIIFSP TGKLHEFSSS  60
STSMQNTIER YQKHDADVKE NSQVRQPLQL YHDVLSNILC HLKHEAANLA KKIESLEVSK  120
RKLMGEGLES CSINELQTTE NQLEKSLLII RERKHQLHRK KIEQLKQKEK QLLEENEVLR  180
ERLSLTVRED VGLDNGINRT NRKKYKTLLP YETSQNSRVV KTELQIGRPE RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-59MIKC_MADS family protein