PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440733.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 163aa MW: 18948.6 Da PI: 9.7866

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.5	1.8e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC++eva+++fss+gkl+e+ss XP_026440733.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEVEVALLVFSSRGKLFEFSS 59 8***********************************************96 PP
2	K-box	63.6	7.5e-22	83	162	5	84
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 ++k+ e++++++lq e+a+L k+ienL+ ++R+l+GedLes+s+ eL+ e+qLeksl +iR+k n+l +e+i++ +k XP_026440733.1 83 NNKAIEQQNSQQLQYEVANLAKKIENLEASKRKLMGEDLESCSIDELETAENQLEKSLLNIREKMNQLQRENIKQVEQKV 162 4555899*******************************************************************999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE VEVALLVFSS RGKLFEFSSS 60 STSVQKMIQR YQKYYKDGNY GNNNKAIEQQ NSQQLQYEVA NLAKKIENLE ASKRKLMGED 120 LESCSIDELE TAENQLEKSL LNIREKMNQL QRENIKQVEQ KVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	2e-57	MIKC_MADS family protein