PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440748.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 393aa MW: 44866.2 Da PI: 8.8975

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.7	3.2e-16	145	236	2	99
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +k +++s+v + +l lpk+f+++h +++ e+ +++l de+g +++ + k+ + l++GWk F+ +++L++gD vv++l++ ++++v XP_026440748.1 145 VKSMVRSHVYSCFWLGLPKEFCDSHlSMDC-EKWEMVLVDEKGIEYDTIY--IPKRTG--LSGGWKAFALDHKLDDGDAVVLELTE--PARFKVY 232 6999*******************85554.4579***********..555544..*********************965..5555999 PP EE-S CS B3 96 vfrk 99 +fr XP_026440748.1 233 IFRV 236 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MAKGCTTTAN SYEEARKKQI EDNEKRLQEL GIAKVTKCLS EVINMEKQST AKKQAKPRVR 60 KTPASPVEVR RSSRERNTVS YKEEFVDDHL RGNRFRSSSS LNTSYLARPL EEIKVPTYEQ 120 RSDTMERAGI FRNELKRKSE YPSCVKSMVR SHVYSCFWLG LPKEFCDSHL SMDCEKWEMV 180 LVDEKGIEYD TIYIPKRTGL SGGWKAFALD HKLDDGDAVV LELTEPARFK VYIFRVSDKW 240 GDNWGDVNAA EVKKPSFEDS TNENTSEEKI VESKAEGRRT RNAKRVKKSD ADDSVSEEED 300 TVRRTHNSKR LKKTDTDSGD FAGSMLEEKA VVETRARGRT RNPKVVKKSD TNDADVDENS 360 SEEKEEKDVV GDPKATGRRT RKSQRVMKSA TAD

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MAKGCTTTAN SYEEARKKQI EDNEKRLQEL GIAKVTKCLS EVINMEKQST AKKQAKPRVR  60
KTPASPVEVR RSSRERNTVS YKEEFVDDHL RGNRFRSSSS LNTSYLARPL EEIKVPTYEQ  120
RSDTMERAGI FRNELKRKSE YPSCVKSMVR SHVYSCFWLG LPKEFCDSHL SMDCEKWEMV  180
LVDEKGIEYD TIYIPKRTGL SGGWKAFALD HKLDDGDAVV LELTEPARFK VYIFRVSDKW  240
GDNWGDVNAA EVKKPSFEDS TNENTSEEKI VESKAEGRRT RNAKRVKKSD ADDSVSEEED  300
TVRRTHNSKR LKKTDTDSGD FAGSMLEEKA VVETRARGRT RNPKVVKKSD TNDADVDENS  360
SEEKEEKDVV GDPKATGRRT RKSQRVMKSA TAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	5e-47	B3 family protein