PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440861.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 278aa    MW: 31782.2 Da    PI: 4.8782
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.42.2e-1222107898
                     -HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   8 sdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +d+++ +  ++pk f +++    +   ++   tl++ +  +sW+vkl      + + +t+GW++F ka++L  g ++vF+++g ++  + v vf+
  XP_026440861.1  22 PDSSSAHVPIIPKAFQTDYlvdTE--DSEGVATLKStPLKKSWKVKL------NDFKFTDGWEHFFKAHELSMGNILVFEYEG-HDLIFQVWVFD 107
                     4566666789******99997522..23335777776888*******......5678************************98.45545776665 PP
2B351.12.4e-16183275297
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     +++l +s++  ++ l++p+ f +++  + +  e  t++l+d++g+++ +kli rk s ++ ++ GW +F  ++gLk gD+++F+ ++++e e++v
  XP_026440861.1 183 ITTL-KSYNIGRSFLTIPRIFSKSNipDDV--E--TIILKDKEGKEMPIKLIRRKDSYGVNFGFGWYDFQFEKGLKKGDICLFEQENEDEMEFTV 272
                     4555.899999999*********9965434..3..8***************99999999*************************76657777788 PP

                     EEE CS
              B3  95 kvf 97 
                     +v+
  XP_026440861.1 273 SVI 275
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MLDMERMVCS SSKPHFFRPI LPDSSSAHVP IIPKAFQTDY LVDTEDSEGV ATLKSTPLKK  60
SWKVKLNDFK FTDGWEHFFK AHELSMGNIL VFEYEGHDLI FQVWVFDLSC CEVEYSTESL  120
MSEGIVKNEI HHCETGAKGM DRAAGISKGK GKCKVEEDSE ECDDKLEETK EDATNISKCP  180
HFITTLKSYN IGRSFLTIPR IFSKSNIPDD VETIILKDKE GKEMPIKLIR RKDSYGVNFG  240
FGWYDFQFEK GLKKGDICLF EQENEDEMEF TVSVIGKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.17e-28B3 family protein