PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440865.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NF-YC

Protein Properties

Length: 248aa MW: 28293.8 Da PI: 5.3266

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.7	1.1e-55	65	168	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kacelfileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_026440865.1 65 QLQVFWSNQmqeIEHVNDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACELFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFL 159 89****9878899**************************************************************************** PP NF-YC 93 vdivprdel 101 vdivprd+l XP_026440865.1 160 VDIVPRDDL 168 *****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MDKSGNQVPK QEQERQPTRE DASSPEFEQE TEIEASDSPR PPSFSGPQHQ LAYPPQVQHF 60 HQQQQLQVFW SNQMQEIEHV NDFKNHTLPL ARIKKIMKAD EDVRMISAEA PVVFAKACEL 120 FILELTLRSW IHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPRDDLKE DATLGFPRPA 180 EPLPCYFIPR VPQHPSQVGH PVLTYDAGAA HQPRPPVAAA FMPWAQPPPQ QQQGQQQPPQ 240 PQPQQTDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	8e-67	NF-YC family protein