PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440887.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 133aa MW: 15583.4 Da PI: 4.5064

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.5	1.4e-19	40	131	5	98
-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++s++ ++ l++p kfa+++ + + e t+ l de+ ++W v+l+ r+ + ++ ++ GWk+F ++++Lk gD+++F+ +++++ ++v+++ XP_026440887.1 40 TLKSYNIGRSFLTIPTKFAKSNipDDV--E--TVFLIDEERKEWPVRLTRRRDDYGVHFGLGWKDFQSQKRLKKGDICLFEQKNEDKLVFTVSII 130 44899999999*********65434..3..8***********7777777799*********************66557777777776 PP - CS B3 98 r 98 r XP_026440887.1 131 R 131 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence
MSCEVEVDSE ESHVDDYDEL EEVSDDDATS ISKYPHFIAT LKSYNIGRSF LTIPTKFAKS 60 NIPDDVETVF LIDEERKEWP VRLTRRRDDY GVHFGLGWKD FQSQKRLKKG DICLFEQKNE 120 DKLVFTVSII REI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	108	RRRDDYGVHFGLGWKDFQSQKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24700.1	1e-08	B3 family protein