PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440989.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 694aa MW: 77416.1 Da PI: 5.2627

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.2	1.5e-23	131	232	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +k+a+e + + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + + XP_026440989.1 131 FCKILTASDTSTHGGFSVLRKHANESlppldmtQ--ATPTQELIAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGE 221 99*******************9999543..445569********************************************..449 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+v+v+r+ XP_026440989.1 222 NGNLRVGVRRH 232 999****97 PP
2	Auxin_resp	97	2.7e-32	257	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+s+k+ F v+ +Pr+ s+F++ ++k++++lk+ +svGmRfkm+fe+eds+err+sGt++g++d++p +W++SkWrsLk XP_026440989.1 257 ASHAVSMKTLFIVYNKPRT--SQFIIGLNKYLESLKNGFSVGMRFKMRFEGEDSPERRFSGTIIGTNDVSP-QWSDSKWRSLK 336 689*************6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MAFMFDNSSG FPGEVQNNTG YGCDDLYSEL WRACAGPLVD VPKIDERVYY FPQGHMEQLE 60 ASTNEELVQR IPLFNLPSKI LCRVVHIELL AEQETDEVYA RVTLQPEDDP NEPNSLDPCL 120 QEPPREGVQS FCKILTASDT STHGGFSVLR KHANESLPPL DMTQATPTQE LIAKDLHGYE 180 WRFKHIFRGQ PRRHLLTTGW STFVTSKRLV AGDTFVFLRG ENGNLRVGVR RHARQQSNMP 240 SSVISSQSMH LGVLATASHA VSMKTLFIVY NKPRTSQFII GLNKYLESLK NGFSVGMRFK 300 MRFEGEDSPE RRFSGTIIGT NDVSPQWSDS KWRSLKVQWD EPCSTPRPDR VSPWEIEPFV 360 ASPAPPKPIQ PLVSKNKRLR ISTDLPIQGT TASSVASPLW YPGATQSNEV TASSGMDIQS 420 SETQSIWLPK QNENMGNFVN SNGIMRIQRE SLGNASLDLF QDDRTASMWS GHLGYSDADH 480 SLITKNDHMQ DQVESEKKSE TPSGYRLFGI ELINNTNTAA NIVKEPINDI TVSSAIAEIT 540 VPSTLSGSES DPQSALSNAS KEQQVLLQAQ PKSFSTATRS RTKVHMQGIA VGRAVDLTTL 600 DGYDQLINEL EEMFEIKGEL SPRDKWEVVF TDDEGDMMLV GDDPWLEFCK MVKKIFIYSS 660 QEVRRMSPGC KLLSSLGGGE GTLVSLDSNL KTDK

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MAFMFDNSSG FPGEVQNNTG YGCDDLYSEL WRACAGPLVD VPKIDERVYY FPQGHMEQLE  60
ASTNEELVQR IPLFNLPSKI LCRVVHIELL AEQETDEVYA RVTLQPEDDP NEPNSLDPCL  120
QEPPREGVQS FCKILTASDT STHGGFSVLR KHANESLPPL DMTQATPTQE LIAKDLHGYE  180
WRFKHIFRGQ PRRHLLTTGW STFVTSKRLV AGDTFVFLRG ENGNLRVGVR RHARQQSNMP  240
SSVISSQSMH LGVLATASHA VSMKTLFIVY NKPRTSQFII GLNKYLESLK NGFSVGMRFK  300
MRFEGEDSPE RRFSGTIIGT NDVSPQWSDS KWRSLKVQWD EPCSTPRPDR VSPWEIEPFV  360
ASPAPPKPIQ PLVSKNKRLR ISTDLPIQGT TASSVASPLW YPGATQSNEV TASSGMDIQS  420
SETQSIWLPK QNENMGNFVN SNGIMRIQRE SLGNASLDLF QDDRTASMWS GHLGYSDADH  480
SLITKNDHMQ DQVESEKKSE TPSGYRLFGI ELINNTNTAA NIVKEPINDI TVSSAIAEIT  540
VPSTLSGSES DPQSALSNAS KEQQVLLQAQ PKSFSTATRS RTKVHMQGIA VGRAVDLTTL  600
DGYDQLINEL EEMFEIKGEL SPRDKWEVVF TDDEGDMMLV GDDPWLEFCK MVKKIFIYSS  660
QEVRRMSPGC KLLSSLGGGE GTLVSLDSNL KTDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61830.1	0.0	ARF family protein