PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440996.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 162aa MW: 18054.9 Da PI: 9.2658

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00012	13	70	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC............TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas.........kapskKlsKaeiLekAveYIksL 54 + +E++RR +++ ++L +l+ + s ++++ ++ A YI++L XP_026440996.1 13 KTIEKNRRIQMKALCFKLVSLITPTSstivhqkhsSNKDACKPQIDQFDNAAAYIQEL 70 579*******************995448998877655555566777788888888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MKTCKKSGTI DRKTIEKNRR IQMKALCFKL VSLITPTSST IVHQKHSSNK DACKPQIDQF 60 DNAAAYIQEL KKRIDELKRK KQGMIHGGEQ EITNINSISS SSSSSSTSTM TKTNLPGANL 120 PILEVKDLED AMVVVVLTGL NKNFMLYELI NILEEHGAEV MC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	7e-15	bHLH family protein