PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441013.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 263aa MW: 29853.1 Da PI: 4.4074

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.7	1.1e-19	49	103	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +k+ +f++eq++ Le++Fe + ++ +++ LAk+lgL+ rqV +WFqNrRa++k XP_026441013.1 49 KKKKRFSDEQIKSLESMFETETKLEPKMKLLLAKELGLQPRQVAIWFQNRRARWK 103 78899*************************************************9 PP
2	HD-ZIP_I/II	123.9	7.4e-40	49	141	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kk+r+s+eq+k+LE++Fe+e+kLep+ K la+eLglqprqva+WFqnrRAR+k+kqlE+dy+ Lk++yd l+++ e+Le+e+++L ++l++ XP_026441013.1 49 KKKKRFSDEQIKSLESMFETETKLEPKMKLLLAKELGLQPRQVAIWFQNRRARWKSKQLERDYNILKASYDDLASKFENLESEKQALIKQLQK 141 59****************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MLDAEEEFLL DCTTTTMETG ATGVKLESSS SILESSSNDT SMMRKKNNKK KKRFSDEQIK 60 SLESMFETET KLEPKMKLLL AKELGLQPRQ VAIWFQNRRA RWKSKQLERD YNILKASYDD 120 LASKFENLES EKQALIKQLQ KLSDLVGKPR EESSCCGLGL AGNNSSMDGD SDNGDTKYKF 180 EKKPELSVEG GNGLDFRLDP CSEDEHSKEL EYFGQDEEHD LMNIGEPTYG ILSSSEDWGS 240 LDDSTSLFDQ SCSGNSQWWE VWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	77	KKKKRFSDEQIKSLESMFETETKLEPKMK
2	50	78	KKKKRFSDEQIKSLESMFETETKLEPKMK
3	98	106	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-54	HD-ZIP family protein