PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026441349.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 338aa    MW: 38514.5 Da    PI: 4.3037
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026441349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.62.8e-1025109798
                     .-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   7 psdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     ++d ++ + l +p  f +++  +   e s  +    +  + W+vkl      + + +t+GW eF ka++L +g f+ F+++g ++  ++v vf+
  XP_026441349.1  25 HPDCSSADHLAIPIAFQRDYlvD--REDSEGVATLKSPLKIWKVKL------NDFKFTDGWPEFYKAHELSTGYFLAFQYEG-HDLIFRVWVFD 109
                     678888899***********652..444444665666779******......5678************************98.55545777765 PP
2B355.88.1e-18244335598
                     -..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     +++s++  ++ l++p kfa+++  +    +  +++l de+g++W +kl  +++s++  + ++ GW +F + ++Lk gD+++F+ +++++ e++v+
  XP_026441349.1 244 TLKSYNIGRSFLTIPTKFAQSNipD--DVG--DIVLIDEEGKEWPIKL--TRRSDGygVHFGFGWYDFQSKKRLKKGDICLFEQENEDQLEFTVS 332
                     45899999999**********9643..334..7***************..66666656999**********************777799999999 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_026441349.1 333 IIR 335
                     987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLEKMERMGN LTSSISKPHF FQPIHPDCSS ADHLAIPIAF QRDYLVDRED SEGVATLKSP  60
LKIWKVKLND FKFTDGWPEF YKAHELSTGY FLAFQYEGHD LIFRVWVFDL SYCEVEYSIT  120
PLMSEGEDEN EMHCGETGTE GMDRAESIGT SKGKGESEGQ IQGRKEQTSP DDSEGMYRAE  180
SIGTSKGKGE SEGQIQGRKE QTSSDDSEVE EDSEETLDDE DDEMQEVNED DAVSVSKYPH  240
FVATLKSYNI GRSFLTIPTK FAQSNIPDDV GDIVLIDEEG KEWPIKLTRR SDGYGVHFGF  300
GWYDFQSKKR LKKGDICLFE QENEDQLEFT VSIIRIRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.13e-18B3 family protein