PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441848.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 358aa MW: 40016.6 Da PI: 4.2892

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	16	105	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffk +++ ++s+rl lp +f+++ + + +++++l +s ++W+v+l + + y++++GW+eFv +n++k +Df++F++++ e ++ v+ XP_026441848.1 16 FFKLVLNP--HSSNRLKLPVDFVRNVKCQ--IPTEISLIGPSRNVWKVQL--VQVENDYFFEQGWSEFVVDNHMKNKDFCLFEYVE--ENKCQVM 102 56666444..45678******888755..7889***********..888889***********************986..4555788 PP EE- CS B3 96 vfr 98 +f+ XP_026441848.1 103 IFD 105 887 PP
2	B3	49.9	5.8e-16	253	345	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 v+ +s+v + +++lp +f++ + ++ e +t+ ++d++gr W v++ + ++ l++GW++ n+++++D+++F+l++++e l +++ XP_026441848.1 253 VMQTSHVYTDFCVSLPISFCKVILPPNGEAVTVFVRDPHGRAWHVEM--AASEDGlfAQLSTGWRDLSYTNNIEANDVCIFELVKEDE--LQLHI 343 5789**************99966667899************..555555448899*******************987544..58888 PP E- CS B3 97 fr 98 fr XP_026441848.1 344 FR 345 77 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MSNMTSSSIV TGNYEFFKLV LNPHSSNRLK LPVDFVRNVK CQIPTEISLI GPSRNVWKVQ 60 LVQVENDYFF EQGWSEFVVD NHMKNKDFCL FEYVEENKCQ VMIFDSFDGC EREAAFHAVP 120 SQASSSTPDA TTSKGKGKAV EDEGKENAAE DEGIAEPYPG TFASQRRDIT DEDSFVPSRA 180 SSSTPFEATT SKGKEKAVEE DEGKENTVED EGIAEPHTGP FVSQRRDITD EDSFIALDAA 240 LGFESKNPST LMVMQTSHVY TDFCVSLPIS FCKVILPPNG EAVTVFVRDP HGRAWHVEMA 300 ASEDGLFAQL STGWRDLSYT NNIEANDVCI FELVKEDELQ LHIFRVVEEI KPLISCLE

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MSNMTSSSIV TGNYEFFKLV LNPHSSNRLK LPVDFVRNVK CQIPTEISLI GPSRNVWKVQ  60
LVQVENDYFF EQGWSEFVVD NHMKNKDFCL FEYVEENKCQ VMIFDSFDGC EREAAFHAVP  120
SQASSSTPDA TTSKGKGKAV EDEGKENAAE DEGIAEPYPG TFASQRRDIT DEDSFVPSRA  180
SSSTPFEATT SKGKEKAVEE DEGKENTVED EGIAEPHTGP FVSQRRDITD EDSFIALDAA  240
LGFESKNPST LMVMQTSHVY TDFCVSLPIS FCKVILPPNG EAVTVFVRDP HGRAWHVEMA  300
ASEDGLFAQL STGWRDLSYT NNIEANDVCI FELVKEDELQ LHIFRVVEEI KPLISCLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-20	B3 family protein