PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442040.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 206aa    MW: 23365.2 Da    PI: 10.4812
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.93.6e-252471249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +ie++snrqvtfskRrng++KK  EL+vLC+ae+avi+fs+ gk y +
  XP_026442040.1 24 KIESESNRQVTFSKRRNGLFKKVCELCVLCGAEIAVIVFSPAGKAYSF 71
                    79******************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MVMIMKNKKE RKPSQGRKKI PIQKIESESN RQVTFSKRRN GLFKKVCELC VLCGAEIAVI  60
VFSPAGKAYS FGNPHVDSTI SRFLNSQGNS HVNNLQLAVR PADIHRHGFS AHEQHQYMKV  120
VNQLDVEKKK GALVEKLKRL NKFWWEVPID GLSLNELEQM RSAMEELKKT VAERIEELVI  180
NGAASSTSPR IMPTPYLNVK PIGMNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-42M-type_MADS family protein