PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442165.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92234.3 Da    PI: 6.276
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-182078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_026442165.1 20 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP
2START168.35.2e-531653732205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++++v+ +   g+ +l 
  XP_026442165.1 165 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVVNVLPTPngGTMELL 258
                     789*******************************************************.8888888888***************87557****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l +g++v++++S++s+q  p+    +++vRae lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_026442165.1 259 YMQLYAPTTLAPaRDFWLLRYTCVLDDGSLVVCERSLSSTQGGPSmppVQHFVRAEILPSGYLIRPCDGGGSIIHIVDHMDLEPSSVPEVLRPLY 353
                     *****************************************999888889********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_026442165.1 354 ESSTVLAQKTTMAALRQLRQ 373
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MMAVTAAACK DGKGVMDNGK YVRYTPEQVE ALERLYHECP KPSSIRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLTAMNKLLM EENDRLQKQV SHLVYENGYF  120
RQQTQNTTLA TTDNSCESVV TSGQHQLTTP PHPPRDASPA GLLSIAEETL TEFLSKATGT  180
AVEWVQMPGM KPGPDSIGIV AISHGCTGVA ARACGLVGLE PTRVAEILKD RPSWFRDCRA  240
VDVVNVLPTP NGGTMELLYM QLYAPTTLAP ARDFWLLRYT CVLDDGSLVV CERSLSSTQG  300
GPSMPPVQHF VRAEILPSGY LIRPCDGGGS IIHIVDHMDL EPSSVPEVLR PLYESSTVLA  360
QKTTMAALRQ LRQIALEVSQ STVTGWGRRP AALRALTQRL SRGFNEALNG FTDEGWSITG  420
NDGIDDVTIL VNSSPGKMMG ANNSFINGFS AVSNAVLCAK ASMLLQNVPA AVLLRFLREH  480
RSEWADSSID AYSASVVKAG PFSLPGARFG GFGGQVILPL AHTVEHEESL EVIKLENVGQ  540
CQEDSIMAKD LFLLQLCNGL DENAVGTCAE LIFAPMDSSF ADDAPLLPSG FRIIPLDSGL  600
DSSSPNRTLD LASALEVGQP RNRASGDYAS NGSSLRSVMT IAFQFAFESH LQENVASMAR  660
QYVRSIVSSV QRVALALSPS NLSPHSGLRP PPGSPEAQTL AHWISNSYRR FMGAELLKSN  720
GEASESILKT LWHQSDAIMC CSIKTLPVFN FANQAGLDML ETTLVALQDI TLEKIFDDHG  780
RKTLYAEFPQ IMQQGFACLQ GGICLSSMGR PISYERAVAW KVLDQEENAH CICFMFVNWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein