PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442170.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22754.9 Da    PI: 6.7701
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442170.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.97.3e-15960151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeyss 51
                    ++ien ++r vtfskRr gi  KA EL+ L  d+ +++i+fs+ gk +++s+
  XP_026442170.1  9 EKIENPTKRMVTFSKRRGGIESKAAELCKLfPDIIISIIVFSPGGKAFTFSN 60
                    57**************************8846******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRKKIEIEK IENPTKRMVT FSKRRGGIES KAAELCKLFP DIIISIIVFS PGGKAFTFSN  60
SPLGVCNMVE RFLKEEAKDK KQEDRNSHEA KNSTYVQECT NKAGVGSGSD SYWWHNIDME  120
ELDSVEKLKS VRESLANLKQ NLSARKEKLT AAALSPLSSP SSTIEDTIIE DRIVEDAATS  180
ITEKHEAWKI CCKELDLSLN LGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.22e-16MIKC_MADS family protein