PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442171.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 198aa    MW: 22316.5 Da    PI: 8.4978
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.15.6e-141060251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeyss 51
                    +i++ ++r +tfskRr gi  KA EL+ L  d+++++i+fs+ g+ +++s+
  XP_026442171.1 10 KINDPTKRLITFSKRRGGIQSKAAELCRLfADINISIIVFSPGGRAFTFSN 60
                    79999**********************8868******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGRMKIDIEK INDPTKRLIT FSKRRGGIQS KAAELCRLFA DINISIIVFS PGGRAFTFSN  60
SPLGVCNMVE RFLREQTKDK IQENKNIQQC RNKAGVGNGS TDSFWWDNID MEELESVEKL  120
KSVRESLANL KRNLFARKEK LTAAALSPLS SSSSPINDTI IEDRIVEDAA TSITEKHEAW  180
KICCKDHPNL DLSLNLGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.15e-15M-type_MADS family protein