PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026442172.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 214aa    MW: 24431.8 Da    PI: 8.2358
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026442172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.24.2e-131059250
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHH.HT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvL.Cdaevaviifsstgklyeys 50
                    +i n+ +r v fskRr gi  KA  L+ L  d+ v++i+fs+ gk +++ 
  XP_026442172.1 10 KIVNTNKRMVAFSKRRGGIQRKATKLCKLfADIIVCIIVFSPGGKAFTFT 59
                    6899***********************8868*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGRRKIEMEK IVNTNKRMVA FSKRRGGIQR KATKLCKLFA DIIVCIIVFS PGGKAFTFTN  60
SPMGVCYMVQ PFLEEHRKDK KQENKNVHSH KELDSVEKLK DVRESLAKLK QNLSERKEKV  120
ITSSSSLSPS PSSTIEDSII IEDSDDEDCK TSITENHEAR KTSGDDHHDL DLSLGWQLKE  180
TMSLFDKVEE QPPFLKRDIG HHMVKQCQSD PSQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.15e-14M-type_MADS family protein